Andropogoneae Species
Michelle C. Stitzer
Anatherum virginicum
The assembly is haploid, and the genome is diploid. It has a haploid genome size of 900 Mb, and has 10 haploid chromosomes.
Species herbarium records
Herbarium records of Anatherum virginicum from AuBuchon-Elder et al 2022 are plotted with black points, The sampled individual this genome was generated from is shown in a colored point. The green background shows the biogeographic ranges of all Andropogoneae species in AuBuchon-Elder et al 2022.
Highlighted Figure 1
Figure 1 from the main text, with Anatherum virginicum
highlighted with colored points.
Highlighted Figure 2
Figure 2 from the main text, with Anatherum virginicum
highlighted with colored points.
Dotplot of Anatherum virginicum vs. Paspalum vaginatum
Like dotplots shown in Figure 3 of the main text, this shows syntenic blocks in Anatherum virginicum along the y-axis, vs P. vaginatum on the x-axis. As Anatherum virginicum is a diploid with a haploid assembly, we expect 1 paths for any x-axis position.
Fractionation of Anatherum virginicum
Like plots shown in Figure 4 of the main text, this shows proportion of retained genes in Anatherum virginicum along the y-axis, vs P. vaginatum gene index on the x-axis. As Anatherum virginicum is a diploid with a haploid assembly, we expect 1 lines, one for each subgenome.
Highlighted Figure 5
Figure 5 from the main text, with Anatherum virginicum highlighted with colored points or lines.
Spatial distribution of genes and TEs
Density of genes and repeats along the longest sequence (contig, scaffold, or chromosome) of Anatherum virginicum in 1 Mb bins. Gene annotation shown is all Helixer genes.
