Andropogoneae Species
Michelle C. Stitzer
Bothriochloa laguroides
The assembly is allelic, and the genome is hexaploid. It has a haploid genome size of 1700 Mb, and has 30 haploid chromosomes.
Species herbarium records
Herbarium records of Bothriochloa laguroides from AuBuchon-Elder et al 2022 are plotted with black points, The sampled individual this genome was generated from is shown in a colored point. The green background shows the biogeographic ranges of all Andropogoneae species in AuBuchon-Elder et al 2022.
Highlighted Figure 1
Figure 1 from the main text, with Bothriochloa laguroides
highlighted with colored points.
Highlighted Figure 2
Figure 2 from the main text, with Bothriochloa laguroides
highlighted with colored points.
Dotplot of Bothriochloa laguroides vs. Paspalum vaginatum
Like dotplots shown in Figure 3 of the main text, this shows syntenic blocks in Bothriochloa laguroides along the y-axis, vs P. vaginatum on the x-axis. As Bothriochloa laguroides is a hexaploid with an allelic assembly, we expect 6 paths for any x-axis position.
Fractionation of Bothriochloa laguroides
Like plots shown in Figure 4 of the main text, this shows proportion of retained genes in Bothriochloa laguroides along the y-axis, vs P. vaginatum gene index on the x-axis. As Bothriochloa laguroides is a hexaploid with an allelic assembly, we expect 6 lines, two for each subgenome.
Highlighted Figure 5
Figure 5 from the main text, with Bothriochloa laguroides highlighted with colored points or lines.
Spatial distribution of genes and TEs
Density of genes and repeats along the longest sequence (contig, scaffold, or chromosome) of Bothriochloa laguroides in 1 Mb bins. Gene annotation shown is all Helixer genes.
