Andropogoneae Species
Michelle C. Stitzer
Elionurus tripsacoides
The assembly is haploid, and the genome is tetraploid. It has a haploid genome size of 4400 Mb, and has 10 haploid chromosomes.
Species herbarium records
Herbarium records of Elionurus tripsacoides from AuBuchon-Elder et al 2022 are plotted with black points, The sampled individual this genome was generated from is shown in a colored point. The green background shows the biogeographic ranges of all Andropogoneae species in AuBuchon-Elder et al 2022.
Highlighted Figure 1
Figure 1 from the main text, with Elionurus tripsacoides
highlighted with colored points.
Highlighted Figure 2
Figure 2 from the main text, with Elionurus tripsacoides
highlighted with colored points.
Dotplot of Elionurus tripsacoides vs. Paspalum vaginatum
Like dotplots shown in Figure 3 of the main text, this shows syntenic blocks in Elionurus tripsacoides along the y-axis, vs P. vaginatum on the x-axis. As Elionurus tripsacoides is a tetraploid with a haploid assembly, we expect 2 paths for any x-axis position.
Fractionation of Elionurus tripsacoides
Like plots shown in Figure 4 of the main text, this shows proportion of retained genes in Elionurus tripsacoides along the y-axis, vs P. vaginatum gene index on the x-axis. As Elionurus tripsacoides is a tetraploid with a haploid assembly, we expect 2 lines, one for each subgenome.
Highlighted Figure 5
Figure 5 from the main text, with Elionurus tripsacoides highlighted with colored points or lines.
Spatial distribution of genes and TEs
Density of genes and repeats along the longest sequence (contig, scaffold, or chromosome) of Elionurus tripsacoides in 1 Mb bins. Gene annotation shown is all Helixer genes.
