Andropogoneae Species
Michelle C. Stitzer
Rottboellia tuberculosa
The assembly is haploid, and the genome is diploid. It has a haploid genome size of 1600 Mb, and has 9 haploid chromosomes.
Species herbarium records
Herbarium records of Rottboellia tuberculosa from AuBuchon-Elder et al 2022 are plotted with black points, The sampled individual this genome was generated from is shown in a colored point. The green background shows the biogeographic ranges of all Andropogoneae species in AuBuchon-Elder et al 2022.
Highlighted Figure 1
Figure 1 from the main text, with Rottboellia tuberculosa
highlighted with colored points.
Highlighted Figure 2
Figure 2 from the main text, with Rottboellia tuberculosa
highlighted with colored points.
Dotplot of Rottboellia tuberculosa vs. Paspalum vaginatum
Like dotplots shown in Figure 3 of the main text, this shows syntenic blocks in Rottboellia tuberculosa along the y-axis, vs P. vaginatum on the x-axis. As Rottboellia tuberculosa is a diploid with a haploid assembly, we expect 1 paths for any x-axis position.
Fractionation of Rottboellia tuberculosa
Like plots shown in Figure 4 of the main text, this shows proportion of retained genes in Rottboellia tuberculosa along the y-axis, vs P. vaginatum gene index on the x-axis. As Rottboellia tuberculosa is a diploid with a haploid assembly, we expect 1 lines, one for each subgenome.
Highlighted Figure 5
Figure 5 from the main text, with Rottboellia tuberculosa highlighted with colored points or lines.
Spatial distribution of genes and TEs
Density of genes and repeats along the longest sequence (contig, scaffold, or chromosome) of Rottboellia tuberculosa in 1 Mb bins. Gene annotation shown is all Helixer genes.
