Andropogoneae Species
Michelle C. Stitzer
Thelepogon elegans
The assembly is allelic, and the genome is diploid. It has a haploid genome size of 1500 Mb, and has 10 haploid chromosomes.
Species herbarium records
Herbarium records of Thelepogon elegans from AuBuchon-Elder et al 2022 are plotted with black points, The sampled individual this genome was generated from is shown in a colored point. The green background shows the biogeographic ranges of all Andropogoneae species in AuBuchon-Elder et al 2022.
Highlighted Figure 1
Figure 1 from the main text, with Thelepogon elegans
highlighted with colored points.
Highlighted Figure 2
Figure 2 from the main text, with Thelepogon elegans
highlighted with colored points.
Dotplot of Thelepogon elegans vs. Paspalum vaginatum
Like dotplots shown in Figure 3 of the main text, this shows syntenic blocks in Thelepogon elegans along the y-axis, vs P. vaginatum on the x-axis. As Thelepogon elegans is a diploid with an allelic assembly, we expect 2 paths for any x-axis position.
Fractionation of Thelepogon elegans
Like plots shown in Figure 4 of the main text, this shows proportion of retained genes in Thelepogon elegans along the y-axis, vs P. vaginatum gene index on the x-axis. As Thelepogon elegans is a diploid with an allelic assembly, we expect 2 lines, two for each subgenome.
Highlighted Figure 5
Figure 5 from the main text, with Thelepogon elegans highlighted with colored points or lines.
Spatial distribution of genes and TEs
Density of genes and repeats along the longest sequence (contig, scaffold, or chromosome) of Thelepogon elegans in 1 Mb bins. Gene annotation shown is all Helixer genes.
